| | Age | Grade | Athlete | Time | ST | Team | Date | Meet |
| 1. | | 11 | Matt Pastuszak | 12:06.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 2. | | 12 | Benjamin (Ben) Dema... | 12:21.1PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 3. | | 9 | Matt Pias | 12:29.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 4. | | 11 | Sam Verzino | 12:31.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 5. | | 11 | Mike Bergamo | 12:32.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 6. | | 11 | Jack Hagler | 12:39.3PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 7. | | 12 | Willie Milam | 12:41.8PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 8. | | 12 | Joshua Pollitt | 12:44.0PR | CT | Coginchaug | Sep 15
| Mercy Cross Country Invitational |
| 9. | | 11 | Jani Lane | 12:48.0PR | AK | Service | Aug 22
| Bartlett Relays |
| | | 12 | Garritt Crowley | 12:48.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 11. | | 9 | Michael Barrett | 12:49.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 12. | | 9 | Matthew Palasciano | 12:50.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 13. | | 9 | Sebastian Herrera | 12:51.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 14. | | 11 | Nat Selleck | 12:52.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 15. | | 12 | Ciaran Willis | 12:55.5PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 16. | 17 | 12 | Jacob Kirk | 12:55.7PR | AK | Grace Christian | Aug 22
| Bartlett Relays |
| 17. | | 11 | Chad Maloy | 12:58.0PR | NY | Springville-Griffith Institute | Sep 12
| JFK XC Invitational |
| 18. | | 11 | Collin Hubert | 12:58.5 | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 19. | | 10 | Quin O'Connor | 12:58.6PR | NY | St Josephs Collegiate Inst | Sep 12
| JFK XC Invitational |
| 20. | | 10 | David Leavy | 12:59.7 | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 21. | | 11 | Silas Talbot | 13:00.0PR | AK | Service | Aug 22
| Bartlett Relays |
| | | 9 | Noah Matthews | 13:00.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 23. | | 12 | Robert Walgren | 13:02.0PR | AK | Service | Aug 22
| Bartlett Relays |
| | | 8 | Chase Geary | 13:02.0PR | KY | Muhlenberg County | Oct 22
| Western Kentucky MS & Elem Championships |
| 25. | | 10 | Roman Kirkov | 13:03.0 | WA | Union | Oct 13
| GSHL: Mt. View, Kelso, Hudson's Bay @ Prairie |
| 26. | | 11 | Kevin O'Connor | 13:04.9PR | NY | East Aurora | Sep 12
| JFK XC Invitational |
| 27. | | 10 | Kolton Sheldon | 13:05.7PR | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 28. | | 12 | Wade Meddles | 13:06.0 | NV | Sierra Lutheran | Sep 4
| Nevada/Jim Vanden Heuvel Twilight Cross Count... |
| 29. | | 10 | John Michael | 13:12.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 30. | | 11 | Connor Moylan | 13:12.2PR | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 31. | | 12 | Jon LaPlante | 13:14.0PR | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 32. | | 12 | Dylan Anthony | 13:15.0PR | AK | Kodiak | Aug 22
| Bartlett Relays |
| 33. | | 12 | Paul Fleckenstein | 13:16.7PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| | | 9 | Scott Carpenter | 13:16.7PR | MA | Lenox Memorial Middle & High | Oct 17
| Brown Invitational |
| 35. | | 12 | Quinn Rochford | 13:17.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 36. | | 9 | Sean Rogers | 13:18.0PR | CT | Coginchaug | Sep 15
| Mercy Cross Country Invitational |
| 37. | | 12 | Zach Ahart | 13:18.2PR | NY | Starpoint Central | Sep 12
| JFK XC Invitational |
| 38. | | 12 | Connor Mathews | 13:18.5PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 39. | | 12 | Chris Miller | 13:19.2PR | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 40. | | 12 | Nick Tomanelli | 13:20.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 41. | | 10 | Jim Coleman | 13:21.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 42. | | 9 | Trevor Crawley | 13:21.2PR | RI | Cumberland | Oct 17
| Brown Invitational |
| 43. | | 9 | Garrett Yantosh | 13:22.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 44. | | 12 | Kenny Krotzer | 13:23.0PR | WA | Auburn Riverside | Sep 9
| Team Time Trial |
| | | 12 | Kyle Pilecki | 13:23.0PR | NY | West Seneca East | Sep 12
| JFK XC Invitational |
| | | - | Matt LeClerc | 13:23.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| 47. | | 11 | Nick Curello | 13:24.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 48. | | 12 | Craig Schrankler | 13:25.4PR | MO | LSH Lee's Summit | Sep 11
| UMC Mule Run 2009 |
| 49. | | 11 | Ryan Koch | 13:25.7PR | NY | Depew | Sep 12
| JFK XC Invitational |
| 50. | | 10 | Ryan Stevens | 13:25.9 | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 51. | | 11 | Sam Dickerson | 13:26.6PR | MO | Moberly | Sep 11
| UMC Mule Run 2009 |
| 52. | | 11 | Daniel Froese | 13:28.0PR | WA | Prairie | Oct 13
| GSHL: Mt. View, Kelso, Hudson's Bay @ Prairie |
| | | 10 | Austin Grewell | 13:28.0PR | CA | Shasta | Oct 28
| Red Bluff v Shasta |
| 54. | | 10 | David McCaslin | 13:28.3 | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 55. | | 10 | Ben Oberlander | 13:29.0PR | CA | Shasta | Oct 28
| Red Bluff v Shasta |
| 56. | | 10 | Sam Izzarelli | 13:30.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| | | 10 | Tanner Sork | 13:30.0PR | WA | Union | Oct 13
| GSHL: Mt. View, Kelso, Hudson's Bay @ Prairie |
| 58. | | 12 | Chuck Mule | 13:30.1PR | NY | St Josephs Collegiate Inst | Sep 12
| JFK XC Invitational |
| 59. | | 12 | Derek Lee | 13:30.9PR | MO | Clinton | Sep 11
| UMC Mule Run 2009 |
| 60. | | 12 | Marshall Beranek | 13:31.0 | OR | South Salem | Oct 21
| North vs. South Civil War |
| 61. | | 11 | Steven Raimondi | 13:31.1PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 62. | | 11 | Cole Townsend | 13:31.4PR | NY | Canisius | Sep 12
| JFK XC Invitational |
| 63. | | 11 | Aaron Wheatall | 13:34.0PR | AK | Service | Aug 22
| Bartlett Relays |
| | | 10 | Charles Carpenter | 13:34.0PR | WA | Union | Oct 13
| GSHL: Mt. View, Kelso, Hudson's Bay @ Prairie |
| 65. | | 9 | Nicholas Korhumel | 13:34.4PR | IL | Libertyville | Sep 5
| Racine Horlick Rebel Invite |
| 66. | | 12 | Mitch Murdock | 13:35.0PR | WA | Kingston | Oct 14
| Bremerton, Kingston @ Olympic |
| 67. | | 11 | Henry Murphy | 13:36.2PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| | | 9 | Sean Phillips | 13:36.2PR | NY | East Aurora | Sep 12
| JFK XC Invitational |
| 69. | | 10 | Ramon Villa | 13:37.0 | OR | North Salem | Oct 21
| North vs. South Civil War |
| 70. | 18 | 12 | Andrew Arnold | 13:37.4PR | AK | Grace Christian | Aug 22
| Bartlett Relays |
| 71. | | 11 | Alex Weberg | 13:37.5PR | NY | East Aurora | Sep 12
| JFK XC Invitational |
| 72. | | 11 | Taylor Park | 13:37.8PR | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 73. | | 9 | Jason Henrich | 13:37.9PR | MA | Taunton | Oct 17
| Brown Invitational |
| 74. | | 10 | Zach Lemberg | 13:38.0PR | WA | Union | Oct 13
| GSHL: Mt. View, Kelso, Hudson's Bay @ Prairie |
| | | 9 | Aaron Peterson | 13:38.0PR | NY | Warwick Valley | Oct 17
| Brown Invitational |
| 76. | | 12 | Matt Boileau | 13:38.1PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 77. | | - | Eli Danli | 13:38.2PR | NY | Canisius | Sep 12
| JFK XC Invitational |
| 78. | | 12 | Nate Gesell | 13:39.0PR | WA | Auburn Riverside | Sep 9
| Team Time Trial |
| 79. | | 12 | Ryan Smart | 13:39.5PR | OR | Jesuit | Sep 3
| Green & Gold Intrasquad time trial |
| 80. | | 12 | Shane Wilson | 13:39.9PR | MO | Blue Springs South | Sep 11
| UMC Mule Run 2009 |
| 81. | | 9 | Mitchell Brown | 13:40.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 82. | | 9 | Martin Martinez | 13:40.6PR | IL | Gurnee (Warren) | Sep 5
| Racine Horlick Rebel Invite |
| 83. | | 11 | Mike Bendtsen | 13:41.0PR | CT | Holy Cross | Sep 15
| Mercy Cross Country Invitational |
| | | 10 | Matthew Lutz | 13:41.0PR | WA | Olympic | Oct 14
| Bremerton, Kingston @ Olympic |
| 85. | | - | Tom Shock | 13:42.0PR | CT | Coginchaug | Sep 15
| Mercy Cross Country Invitational |
| | | 11 | Ryan Danby | 13:42.0PR | CT | Xavier (CT) | Sep 15
| Mercy Cross Country Invitational |
| 87. | | 10 | Andrew Jensen | 13:43.0PR | OR | South Salem | Oct 21
| North vs. South Civil War |
| 88. | | 10 | Wade Doty | 13:45.0PR | WA | Kingston | Oct 14
| Bremerton, Kingston @ Olympic |
| 89. | | 12 | Tyler King | 13:45.4PR | MO | Liberty | Sep 11
| UMC Mule Run 2009 |
| 90. | | 10 | Stephen Clapp | 13:46.6PR | NY | Kenmore East | Sep 12
| JFK XC Invitational |
| 91. | | 9 | Felix Chang | 13:47.0PR | MA | Lexington | Oct 17
| Brown Invitational |
| 92. | | 12 | Sean Reed | 13:48.1PR | MO | Warrensburg | Sep 11
| UMC Mule Run 2009 |
| 93. | | 9 | Nathaniel Adams | 13:49.2PR | MA | Lexington | Oct 17
| Brown Invitational |
| 94. | | 10 | Will Thomas | 13:49.6 | MO | LSN Lee's Summit North | Sep 11
| UMC Mule Run 2009 |
| 95. | | 11 | Ryan Urie | 13:50.0PR | CA | Patrick Henry | Oct 20
| Ronald McDonald Run for the Fries |
| 96. | | 9 | James Dickinson | 13:50.7PR | NY | Northport | Oct 17
| Brown Invitational |
| 97. | | 12 | Dane Goodman | 13:51.0 | AK | Service | Aug 22
| Bartlett Relays |
| 98. | | 11 | Philip Fending | 13:51.9PR | NY | Niagara-Wheatfield | Sep 12
| JFK XC Invitational |
| 99. | | - | James Hennessey | 13:52.0PR | CT | St. Paul Catholic | Sep 15
| Mercy Cross Country Invitational |
| 100. | | 9 | Sean Houlahan | 13:52.3PR | NY | Warwick Valley | Oct 17
| Brown Invitational |