| 1. | So | | Ryan Haebe | 8:36.46a | CO | Western State | Mt. SAC Relays | Thu, Apr 19 |
| 2. | Sr | | Tom Karbo | 8:44.37a | SD | Augustana (SD) | Mt. SAC Relays | Thu, Apr 19 |
| 3. | Jr | | Micah Chelimo | 8:45.63a | AK | Alaska-Anchorage | Mt. SAC Relays | Thu, Apr 19 |
| 4. | So | | Tabor Stevens | 8:48.43a | CO | Adams State | Mt. SAC Relays | Thu, Apr 19 |
| 5. | Sr | | David Goodman | 8:53.37a | CO | Western State | Mt. SAC Relays | Thu, Apr 19 |
| 6. | Jr | | Michael Jordan | 8:55.16a | IN | Southern Indiana | Washington University Invitational | Fri, Mar 30 |
| 7. | Sr | | Jeff Nordquist | 9:00.64a | MI | Grand Valley State | Hillsdale College Gina Relays | Thu, Apr 26 |
| 8. | Sr | | Dan Sprinkle | 9:03.41a | OR | Western Oregon | Beach Invitational | Sat, Apr 21 |
| 9. | Sr | | James Mee | 9:03.90 | MA | American International | Raleigh Relays | Sat, Mar 31 |
| 10. | Sr | | Jesus Escareno | 9:04.32a | WI | Wisconsin-Parkside | Dr. Keeler Invitational | Fri, May 11 |
| 11. | Jr | | Jake Isaacson | 9:04.43a | MI | Grand Valley State | Hillsdale College Gina Relays | Thu, Apr 26 |
| 12. | Jr | | Michael Callison | 9:05.60a | IN | Southern Indiana | Mt. SAC Relays | Thu, Apr 19 |
| 13. | Jr | | Trevor Blackman | 9:07.95a | CO | Western State | Don Kirby Invitational | Sat, Apr 7 |
| 14. | Sr | | Jeffrey Wysong | 9:09.15a | MI | Hillsdale | GVSU 2nd to Last Chance | Fri, May 11 |
| 15. | Fr | | Adam Sinda | 9:10.91a | CO | Western State | Beach Invitational | Sat, Apr 21 |
| 16. | Fr | | Dylan Doss | 9:15.03a | TX | West Texas A&M | Don Kirby Invitational | Sat, Apr 7 |
| 17. | Sr | | Bryan Beegle | 9:16.37a | PA | Shippensburg | Lannigan Last Chance | Sat, May 12 |
| 18. | Jr | | Mike Gibbons | 9:17.21a | MI | Grand Valley State | Hillsdale College Gina Relays | Thu, Apr 26 |
| 19. | Jr | | AJ Baker | 9:17.36a | WA | Seattle Pacific | Mt. SAC Relays | Thu, Apr 19 |
| 20. | So | | Steve Hammond | 9:18.88a | NC | Wingate | Wolfpack Last Chance | Sun, May 13 |
| 21. | Jr | | Tyler Curtis | 9:22.02a | CO | Colorado School of Mines | Mt. SAC Relays | Thu, Apr 19 |
| 22. | Sr | | Jon Wetters | 9:23.40a | MI | Saginaw Valley State | GVSU Last Chance | Sat, May 12 |
| 23. | Sr | | Jake Sitler | 9:23.41a | PA | Shippensburg | VMI/W&L Invitational | Sat, Mar 24 |
| 24. | Sr | | Miles Dunbar | 9:24.54a | CA | Chico State | Stanford Invitational | Sat, Apr 7 |
| 25. | Jr | | Jordan Roose | 9:24.80 | PA | Edinboro U of PA | Raleigh Relays | Sat, Mar 31 |
| 26. | So | | Ryan Ziolko | 9:25.70a | MI | Grand Valley State | GVSU 2nd to Last Chance | Fri, May 11 |
| 27. | Sr | | T.R. Pursell | 9:26.51a | MO | Northwest Missouri State | Drake Relays 2012 | Sat, Apr 28 |
| 28. | Sr | | Adrian Carrillo | 9:27.98a | TX | Incarnate Word | Hillsdale College Gina Relays | Thu, Apr 26 |
| 29. | So | | Isaac Chelimo | 9:29.34a | TX | Texas A&M-Commerce | Michael Johnson/Dr. Pepper Classic | Sat, Apr 21 |
| 30. | Sr | | Allen Ernst | 9:29.81a | MO | Missouri S&T | Drake Relays 2012 | Sat, Apr 28 |
| 31. | Sr | | Wojciech Kopec | 9:29.88a | AR | Harding | Rhodes Open | Sat, Mar 17 |
| 32. | Sr | | Eric Brill | 9:30.83a | WA | Western Washington | WWU Ralph Vernacchia Invitational | Sat, Mar 31 |
| 33. | So | | Andres DeLa Cruz | 9:31.14a | CA | CS Los Angeles | Cal/Nevada Championships | Sat, Mar 31 |
| 34. | Sr | | Steven Busch | 9:31.25a | MO | Drury | K.T. Woodman Classic | Sat, Apr 14 |
| 35. | Sr | | Paul Hoffman | 9:35.13a | NC | Mount Olive | Coastal Carolina University Invitational | Sat, Mar 10 |
| 36. | Fr | | Jordan Noe | 9:37.40 | TN | King College | Raleigh Relays | Sat, Mar 31 |
| 37. | Jr | | David Boiywo | 9:38.60a | FL | Florida Tech | Pepsi Florida Relays | Sat, Apr 7 |
| 38. | So | | Ryan Derrick | 9:39.59a | CO | UC - Colorado Springs | Don Kirby Invitational | Sat, Apr 7 |
| 39. | Jr | | Brendan Chwalek | 9:39.86a | KY | Northern Kentucky | Mt. SAC Relays | Thu, Apr 19 |
| 40. | Jr | | Dylan Peterson | 9:39.87a | WA | Western Washington | WWU Ralph Vernacchia Invitational | Sat, Mar 31 |
| 41. | Jr | | Ethan Jacob | 9:40.84a | IN | Southern Indiana | Washington University Invitational | Fri, Mar 30 |
| 42. | Sr | | Spencer Hunt | 9:41.40a | WA | St Martin's | Willamette Invitational | Sat, Mar 31 |
| 43. | Fr | | Casey Routledge | 9:43.06a | MI | Grand Valley State | USA Junior Outdoor Track & Field Championships | Sun, Jun 17 |
| 44. | Jr | | Neal Anderson | 9:44.88a | CO | Colorado School of Mines | CSU-Pueblo Open 2012 | Fri, Mar 23 |
| 45. | So | | Andre Fuqua | 9:45.56a | TX | Texas A&M-Kingsville | J Fred Duckett Rice Twilight | Fri, Apr 20 |
| 46. | Jr | | Eric. Geddis | 9:45.80 | PA | Slippery Rock | Raleigh Relays | Sat, Mar 31 |
| 47. | So | | Erasmo Ordonez | 9:45.90a | NC | Mount Olive | Coastal Carolina University Invitational | Sat, Mar 10 |
| 48. | Sr | | Cameron Johnson | 9:45.99a | OH | Ashland | Miami Invitational | Sat, Apr 7 |
| 49. | Fr | | Bradon Kampstra | 9:46.88a | MI | Michigan Tech | GVSU Al Owens | Sat, Apr 21 |
| 50. | Sr | | Aaron Denner | 9:47.28a | MI | Grand Valley State | Hillsdale College Gina Relays | Thu, Apr 26 |
| 51. | Jr | | Matt Lenehan | 9:47.66a | CA | UC San Diego | Cal/Nevada Championships | Sat, Mar 31 |
| 52. | So | | Tim Gill | 9:48.30 | NC | Belmont Abbey | Raleigh Relays | Sat, Mar 31 |
| 53. | Jr | | Lewis Price | 9:48.34a | FL | Tampa | Pepsi Florida Relays | Sat, Apr 7 |
| 54. | So | | Russell Lawless | 9:49.27a | GA | Clayton State | Emory Invitational | Sat, Mar 24 |
| 55. | Jr | | Ryan Chapman | 9:49.35a | OR | Western Oregon | Stanford Invitational | Sat, Apr 7 |
| 56. | Sr | | Luke Hetrick | 9:49.60a | ID | Northwest Nazarene | WAR 5 (Wash vs. Ore/Ida/Mont) | Sat, Apr 7 |
| 57. | So | | Zach Boyle | 9:50.17a | MO | Maryville (MO) | Washington University Invitational | Fri, Mar 30 |
| 58. | Fr | | Trenton Morris | 9:50.52a | MO | Southwest Baptist | Washington University Invitational | Fri, Mar 30 |
| 59. | - | | Peter Gelston | 9:52.10a | PA | Shippensburg | VMI/W&L Invitational | Sat, Mar 24 |
| 60. | Sr | | Kevin Denny | 9:52.22a | MO | Central Missouri | Wendy's/Pitt State Invitational | Sat, Mar 31 |
| 61. | Fr | | Patrick Massoels | 9:52.59a | IN | St Joseph's (IN) | GVSU 2nd to Last Chance | Fri, May 11 |
| 62. | Sr | | Jake Schofield | 9:52.69a | TX | Abilene Christian | Michael Johnson/Dr. Pepper Classic | Sat, Apr 21 |
| 63. | Jr | | Isbek Salinas | 9:54.57a | KS | Pittsburg State (KS) | Wendy's/Pitt State Invitational | Sat, Mar 31 |
| 64. | Fr | | Austin Slagle | 9:54.68a | MO | Southwest Baptist | Washington University Invitational | Fri, Mar 30 |
| 65. | Jr | | Omar Hernandez | 9:54.96a | FL | Nova Southeastern | Pepsi Florida Relays | Sat, Apr 7 |
| 66. | Jr | | Scott Ackerman | 9:56.53a | OH | Ashland | Miami Invitational | Sat, Apr 7 |
| 67. | Sr | | Mitchell Haun | 9:57.74a | OK | East Central (OK) | Bison Invitational | Sat, Mar 31 |
| 68. | So | | Alex Mason | 9:58.11a | MO | Missouri Southern | Wendy's/Pitt State Invitational | Sat, Mar 31 |
| 69. | Fr | | Luke Hickman | 9:58.90a | MI | Hillsdale | Hillsdale College Invite | Sat, Apr 14 |
| 70. | Sr | | Armando Ibarra Espinoza | 9:58.91a | CA | Humboldt State | Wildcat Invitational | Sat, Mar 24 |
| 71. | Sr | | Kirk Harvey | 9:59.08a | CO | Metropolitan-Denver | CSU-Pueblo Open 2012 | Fri, Mar 23 |
| 72. | So | | Brady Beagley | 9:59.78a | OR | Western Oregon | Willamette Invitational | Sat, Mar 31 |
| 73. | Fr | | Scott Black | 10:00.33a | PA | Seton Hill | Coastal Carolina University Invitational | Sat, Mar 10 |
| 74. | - | | Alex McGuirk | 10:00.85a | CA | Chico State | Wildcat Invitational | Sat, Mar 24 |
| 75. | Jr | | Jon Graves | 10:01.46a | MI | Michigan Tech | GVSU Al Owens | Sat, Apr 21 |
| 76. | So | | Ethan Silovsky | 10:03.05a | KS | Pittsburg State (KS) | Wendy's/Pitt State Invitational | Sat, Mar 31 |
| 77. | Jr | | Alex Pena | 10:03.24a | SC | Anderson (SC) | Coastal Carolina University Invitational | Sat, Mar 10 |
| 78. | Fr | | Jamin Goecker | 10:03.42a | TX | Angelo State | Michael Johnson/Dr. Pepper Classic | Sat, Apr 21 |
| 79. | Fr | | Colton Wooldridge | 10:04.83a | MO | Missouri Southern | Wendy's/Pitt State Invitational | Sat, Mar 31 |
| 80. | Fr | | Daniel Hauptman | 10:09.87a | CA | UC San Diego | Cal/Nevada Championships | Sat, Mar 31 |
| 81. | Fr | | Brandon Haugen | 10:10.00 | CA | Cal Poly Pomona | Ben Brown | Sat, Mar 10 |
| 82. | Fr | | Chad Scott | 10:11.34a | MI | Saginaw Valley State | Lyle Bennett Open | Sat, Apr 28 |
| 83. | Fr | | Erik Boss | 10:13.77a | CO | Metropolitan-Denver | CSU-Pueblo Open 2012 | Fri, Mar 23 |
| 84. | Jr | | Rocco Mazzanti | 10:17.70a | IN | St Joseph's (IN) | GVSU 2nd to Last Chance | Fri, May 11 |
| 85. | So | | Matt Nodine | 10:21.9ha | WA | Central Washington | 2012 Spike Arlt Invitational | Sat, Apr 14 |
| 86. | So | | David Gladys | 10:22.63a | IN | Southern Indiana | Washington University Invitational | Fri, Mar 30 |
| 87. | So | | Calvin Scharf | 10:23.44a | TX | Texas A&M-Kingsville | J Fred Duckett Rice Twilight | Fri, Apr 20 |
| 88. | Jr | | Rogers Buddy Clements | 10:25.88a | PA | Slippery Rock | Coastal Carolina University Invitational | Sat, Mar 10 |
| 89. | Sr | | Benjamin Kinley | 10:31.67a | DE | Goldey-Beacom | Delaware Outdoor Open | Sat, Apr 14 |
| 90. | Jr | | Derek Slaughter | 10:32.29a | WA | Western Washington | WWU Ralph Vernacchia Invitational | Sat, Mar 31 |
| 91. | Sr | | Chris Menjares | 10:34.05a | NC | Mount Olive | Coastal Carolina University Invitational | Sat, Mar 10 |
| 92. | - | | Scott Felch | 10:34.91a | WA | Western Washington | QUAD Meet | Sat, Mar 3 |
| 93. | Jr | | Greg Baade | 10:37.85a | MI | Saginaw Valley State | MSU Spartan Invitational | Sat, Apr 7 |
| 94. | So | | Raymond Mata | 10:39.85a | TX | Texas A&M-Commerce | Michael Johnson/Dr. Pepper Classic | Sat, Apr 21 |
| 95. | So | | Derek Brandt | 10:40.27a | MI | Michigan Tech | GVSU Al Owens | Sat, Apr 21 |
| 96. | - | | Sebastian Diebel | 10:41.30 | NC | Mount Olive | Raleigh Relays | Sat, Mar 31 |
| 97. | Jr | | Nico Crecco | 10:46.09a | FL | Nova Southeastern | Pepsi Florida Relays | Sat, Apr 7 |
| 98. | Jr | | Bsrat Gide | 10:46.99a | GA | Fort Valley State | Pepsi Florida Relays | Sat, Apr 7 |
| 99. | So | | Nick Springston | 10:49.70 | NC | Mount Olive | Raleigh Relays | Sat, Mar 31 |
| 100. | Fr | | Sam Tillery | 10:56.47a | CO | Colorado School of Mines | CSU-Pueblo Open 2012 | Fri, Mar 23 |
| 101. | Fr | | Collin Erbert | 10:58.95a | KS | Emporia State | K.T. Woodman Classic | Sat, Apr 14 |
| 102. | Jr | | Ryan Blomback | 11:02.67a | MT | Montana State-Billings | 2012 Al Manuel Invitational | Sat, Mar 31 |
| 103. | Sr | | Michael Wallace | 11:03.14a | MD | Bowie State | VCU Ram Invitational | Sat, Mar 17 |
| 104. | - | | Avery Mouton | 11:27.63a | NC | Lees-McRae | Johnson City Invitational | Sat, Mar 31 |
| 105. | - | | Justin McHenry | 11:43.84a | NC | Mount Olive | Coastal Carolina University Invitational | Sat, Mar 10 |
| 106. | Fr | | Tom Rowley | 12:14.71a | MI | Northwood (MI) | Hillsdale College Gina Relays | Thu, Apr 26 |